鸡源大肠杆菌毒力基因检测及分子流行特征
作者:
基金项目:

兽医公共卫生学(KCJSX2020078);河北省科技厅项目(17226612D-2);奶牛振兴重大技术创新专项(19226607D);河北省自然科学基金(C2019402114);探究鸡源致病性大肠杆菌中blaCTX-M基因的传播机制(CXZZSS2020078)


Virulence genes and molecular characteristics of chicken-derived Escherichia coli
Author:
  • 摘要
  • | |
  • 访问统计
  • |
  • 参考文献 [42]
  • |
  • 相似文献 [20]
  • | | |
  • 文章评论
    摘要:

    [目的] 本试验旨在阐明鸡源大肠杆菌致病性及分子流行特性,为探索大肠杆菌流行途径制定合理的防控策略提供新思路。[方法] 2018–2019年在河北省采集病死鸡肝脏样品,通过选择培养基筛选、生化鉴定、血清凝集试验对分离菌株进行系统鉴定,应用PCR方法检测分离株中毒力基因流行情况。参考系统发育群分类方法对大肠杆菌进行分群分析,并参照McMLST网站数据库提供的7对管家基因序列进行多位点序列分型(multilocus sequence typing,MLST)分析。[结果] 结果显示,56株分离株符合大肠杆菌生化特征,分为8个生化表型,B4(30.36%)、B5(25%)和B2(23.21%)为主要生化表型。56株分离株大肠杆菌血清凝集试验均呈阳性,分为11种血清型,O78(26.79%)、O2(23.21%)、O157(17.86%)和O1(14.29%)为主要流行血清型。56株大肠杆菌共检测出15种肠外大肠杆菌毒力基因,未检出papCibeAibeB基因。黏附相关基因fimC和抗血清存活因子相关基因ompA携带率为100%。aatAyijPirp2matiss,检出率分别为98.21%、98.21%、98.21%、96.43%、92.86%。同时,大肠杆菌与铁转运相关基因iroNfyuAiucDirp2检出率均在80%以上。56株大肠杆菌中有20株属于肠出血型大肠杆菌(enterohemorrhagic E.coli,EHEC),其次是肠聚集型大肠杆菌(enteroaggregative E.coli,EAEC)(n=4)、肠产毒素型大肠杆菌(Enterotoxigenic E.coli,ETEC)(n=2)。这些菌株D群分离株较多,其次是B2群。通过MLST分型分析,共分为22个ST型,其中ST88(n=7)、ST85(n=6)、ST243(n=6)型为主要流行型。[结论] 结果显示大肠杆菌血清型多样,毒力因子种类繁多,致病性大肠杆菌同时携带多种毒力基因,表明动物源大肠杆菌具有较强的毒力基础。

    Abstract:

    [Objective] The purpose of this test is to elucidate the pathogenicity and molecular epidemic characteristics of chicken-derived Escherichia coli, and to provide new ideas for exploring reasonable ways to prevent and control E. coli. [Methods] Livers of dead chicken samples were collected in Hebei Province from 2018 to 2019, and the isolated strains were systematically identified through selection of media selection, biochemical identification, and serum agglutination test. Detection of virulence genes in isolates was conducted by PCR. Cluster analysis of E. coli was performed with reference to phylogenetic classification. Multi-sequence typing analysis of housekeeping gene sequences with reference to 7 databases provided on the McMLST website database. [Results] The results show that 56 isolates conformed to the biochemical characteristics of E. coli were divided into 8 biochemical phenotypes. Among them, B4 (30.36%), B5 (25%), and B2 (23.21%) were the main biochemical phenotypes. 56 isolates of E. coli were positive for serum agglutination test, divided into 11 serotypes. O78 (26.79%), O2 (23.21%), O157 (17.86%), and O1 (14.29%) were the main epidemic serotypes. A total of 15 E. coli virulence genes were detected in 56 strains of E. coli, but no papC, ibeA, and ibeB genes were detected. The gene carrying rate of Adhesion-related gene fimC and antiserum survival factor-related gene ompA in all isolates is 100%. The detection rates of the genes of aatA, yijP, irp2, mat, and iss were 98.21%, 98.21%, 98.21%, 96.43% and 92.86%. The detection rates of iroN, fyuA, iucD and irp2 of E. coli and iron transport-related genes were all above 80%. Of the 56 strains of E. coli, 20 are Enterohemorrhagic E. coli (EHEC), followed by Enteroaggregative E. coli (EAEC) (n=4) and enterotoxigenic E. coli (ETEC) (n=2). These strains have more D group isolates, followed by B2 group. According to MLST typing analysis, there are 22 ST types in total, of which ST88, ST85 and ST243 are the main epidemic types. [Conclusion] The serotypes of E. coli were diverse and the virulence factors were various. The pathogenic E. coli also carried multiple virulence genes, indicating that animal-derived E. coli has a strong virulence basis.

    参考文献
    [1] Kabir SML. Avian colibacillosis and salmonellosis:a closer look at epidemiology, pathogenesis, diagnosis, control and public health concerns. International Journal of Environmental Research and Public Health, 2010, 7(1):89-114.
    [2] Wu H, Xia SB, Bu FY, Qi J, Liu YQ, Xu H. Identification of integrons and phylogenetic groups of drug-resistant Escherichia coli from broiler carcasses in China. International Journal of Food Microbiology, 2015, 211:51-56.
    [3] Chen X, Zhang WQ, Yin JJ, Zhang N, Geng SZ, Zhou XH, Wang YH, Gao S, Jia XA. Escherichia coli isolates from sick chickens in China:changes in antimicrobial resistance between 1993 and 2013. The Veterinary Journal, 2014, 202(1):112-115.
    [4] Yuan M, Peng LY, Wu SC, Li JH, Song K, Chen S, Huang JN, Yu JL, An Q, Yi PF, Shen HQ, Fu BD. Schizandrin attenuates inflammation induced by avian pathogenic Escherichia coli in chicken type II pneumocytes. International Immunopharmacology, 2020, 81:106313.
    [5] Liu CY, Zhang JP, Wang BY. Research progress on identification of Escherichia coli O- antigen serogroups. Chinese Journal of Zoonoses, 2016, 32(10):928-933. (in Chinese) 刘璨颖, 张济培, 王丙云. 大肠杆菌O-抗原血清型鉴定研究进展. 中国人兽共患病学报, 2016, 32(10):928-933.
    [6] 韩月. O抗原重组减毒沙门菌对O1、O2和O78禽致病性大肠杆菌的免疫保护研究. 四川农业大学博士学位论文, 2018.
    [7] 金杰. 禽致病性大肠杆菌O1、O2、O78型多重PCR检测方法的建立及应用. 吉林农业大学硕士学位论文, 2018.
    [8] Johnson JR, Russo TA. Molecular epidemiology of extraintestinal pathogenic (uropathogenic) Escherichia coli. International Journal of Medical Microbiology, 2005, 295(6/7):383-404.
    [9] Clermont O, Bonacorsi S, Bingen E. Rapid and simple determination of the Escherichia coli phylogenetic group. Applied and Environmental Microbiology, 2000, 66(10):4555-4558.
    [10] 王艳. 禽致病性大肠杆菌OmpT质粒编码外膜蛋白的表达、纯化与结构的初步研究. 扬州大学硕士学位论文, 2019.
    [11] 许腾林. 肠外致病性大肠杆菌的分离鉴定及比较基因组学分析. 黑龙江八一农垦大学硕士学位论文, 2018.
    [12] Balabanova Y, Klar S, Deleré Y, Wilking H, Faber MS, Lassen SG, Gilsdorf A, Dupke S, Nitschke M, Sayk F, Grunow R, Krause G, Cloeckaert A. Serological evidence of asymptomatic infections during Escherichia coli O104:H4 outbreak in Germany in 2011. PLoS One, 2013, 8(9):e73052.
    [13] Rangel JM, Sparling PH, Crowe C, Griffin PM, Swerdlow DL. Epidemiology of Escherichia coli O157:H7 outbreaks, United States, 1982-2002. Emerging Infectious Diseases, 2005, 11(4):603-609.
    [14] Iguchi A, Iyoda S, Seto K, Morita-Ishihara T, Scheutz F, Ohnishi M, Pathogenic E. coli Working Group in Japan. Escherichia coli O-genotyping PCR:a comprehensive and practical platform for molecular O serogrouping. Journal of Clinical Microbiology, 2015, 53(8):2427-2432.
    [15] Mehdi Y, Létourneau-Montminy MP, Gaucher ML, Chorfi Y, Suresh G, Rouissi T, Brar SK, ôté C, Ramirez AA, Godbout S. Use of antibiotics in broiler production:global impacts and alternatives. Animal Nutrition, 2018, 4(2):170-178.
    [16] Siqueira AK, Ribeiro MG, da S Leite D, Tiba MR, de Moura C, Lopes MD, Prestes NC, Salerno T, da Silva AV. Virulence factors in Escherichia coli strains isolated from urinary tract infection and pyometra cases and from feces of healthy dogs. Research in Veterinary Science, 2009, 86(2):206-210.
    [17] Guo XM, Yang T, He DD, Rao LL, Liu JH, Zeng ZL. Antimicrobial resistance and phylogenetic analysis of E. coli isolated from swine in Guangdong Province. China Animal Husbandry & Veterinary Medicine, 2014, 41(1):182-186. (in Chinese) 郭潇木, 杨铜, 贺丹丹, 饶丽丽, 刘健华, 曾振灵. 广东地区猪源大肠杆菌耐药性及其系统发育群的研究. 中国畜牧兽医, 2014, 41(1):182-186.
    [18] Zhong YM, Zhang XH, Liu WE, Yang F, Yan Q, Liu QX, Li YM, Li HL, Zou MX. Bloodstream infections with Escherichia coli O16-ST131 and O25b-ST131:molecular epidemiology, phylogenetic analysis and antimicrobial resistance. Journal of Southern Medical University, 2018, 38(12):1521-1526. (in Chinese) 钟一鸣, 张晓荷, 刘文恩, 杨芳, 晏群, 刘清霞, 李艳明, 李虹玲, 邹明祥. 血流感染O16-ST131和O25b-ST131型大肠埃希菌的流行、系统发育群及耐药性. 南方医科大学学报, 2018, 38(12):1521-1526.
    [19] 陈伟. 动物源大肠杆菌耐药基因与HPI毒力基因的检测及相关性分析. 安徽农业大学硕士学位论文, 2013.
    [20] Zhou LH, Zhang PF, Zhang J, Wu CM, Tang XS, Hao D, Wang X. Virulence genes and antimicrobial resistance of Escherichia coli isolated from slaughtered pigs. Food Science, 2019, 40(2):264-268. (in Chinese) 周陆红, 张鹏飞, 张杰, 吴聪明, 唐晓双, 郝丹, 王新. 屠宰猪中大肠杆菌毒力基因检测及耐药性分析. 食品科学, 2019, 40(2):264-268.
    [21] Xia QQ, Wen SS, Ma SQ, Wu Q, Zhao LL, Wei CW, Ge JW, Chen HY. Detection and analysis of biofilm formation ability, antimicrobial-resistance and pathogenic island gene of pathogenic Escherichia coli isolated from minks. Chinese Journal of Preventive Veterinary Medicine, 2017, 39(5):361-365. (in Chinese) 夏琦琦, 温珊珊, 马斯琪, 吴强, 赵丽丽, 魏成威, 葛俊伟, 陈洪岩. 水貂源致病性大肠杆菌生物被膜形成能力、耐药性及毒力岛基因检测与分析. 中国预防兽医学报, 2017, 39(5):361-365.
    [22] Wang SH, Meng QM, Dai JJ, Han XA, Han Y, Ding C, Liu HW. Development of an allele-specific PCR assay for simultaneous sero-typing of avian pathogenic Escherichia coli predominant O1, O2, O18 and O78 strains. PLoS One, 2014, 9(5):e96904.
    [23] Li YY, Ge C, Jiao HJ, Wang SD, Yan YJ, Li PG, Zhang ZX, Zhang XZ. Investigation of serotype and drug resistance of Chicken Escherichia coli in Qinhuangdao area. Chinese Journal of Veterinary Medicine, 2019, 55(8):71-76. (in Chinese) 李蕴玉, 葛成, 焦贺静, 王盛达, 闫艳娟, 李佩国, 张召兴, 张香斋. 秦皇岛地区育成鸡大肠杆菌血清型鉴定及耐药性分析. 中国兽医杂志, 2019, 55(8):71-76.
    [24] Bai J, Wang Y. Studies on the serotypes and drug-resistance of chicken pathogenic Escherichia. coli in Henan province. Journal of Henan Agricultural Sciences, 2007, 36(10):105-107. (in Chinese) 白静, 王宇. 河南省鸡致病性大肠杆菌血清型、耐药性的研究. 河南农业科学, 2007, 36(10):105-107.
    [25] Ding BL, Yan MH, Wang YZ, Li XL, Bai PX, Huang JH, Zhao XH, Zhang J. Studies on distribution of serotypes of chicken pathogenic Escherichia coli and outer membrane protein patterns of predominant serogroups in Tianjin regions. Progress in Veterinary Medicine, 2003, 24(2):94-96. (in Chinese) 丁伯良, 鄢明华, 王英珍, 李秀丽, 白朋勋, 黄金海, 赵相华, 张健. 天津地区鸡致病性大肠杆菌血清型分布及其优势血清型的外膜蛋白型研究. 动物医学进展, 2003, 24(2):94-96.
    [26] Yang B, Wang CY, Yang XD, Chang ZS, Tan H, Liu YL. Serotype identification and drug sensitivity test of chicken pathogenic E. coli in Yunnan Province. Yunnan Animal Husbandry & Veterinary Medicine, 2010(3):2-4. (in Chinese) 杨斌, 王传禹, 杨向东, 常志顺, 谭红, 刘艳丽. 云南省鸡致病性大肠杆菌的血清型鉴定及药敏试验. 云南畜牧兽医, 2010(3):2-4.
    [27] 董向磊. 禽致病性大肠杆菌的分离鉴定和分离株毒力基因与致病性相关性研究. 扬州大学硕士学位论文, 2014.
    [28] Li HL, Sun YX, Wu HT, Yan MM, Hao Y, Li SB. Pathogenicity test of dominant serotype strains of avian Escherichia coli in Liaoning Province. Modern Journal of Animal Husbandry and Veterinary Medicine, 2012, (9):29-30. (in Chinese) 李惠兰, 孙永祥, 吴洪涛, 闫明媚, 郝禹, 李树博. 辽宁省禽大肠杆菌优势血清型菌株致病性试验研究. 现代畜牧兽医, 2012, (9):29-30.
    [29] Zhao Y, Wang YM, Zhang WL, Ma B, Wang JW. Serotype identification and susceptibility testing of geese pathogenic Escherichia coli isolated from some regions in Heilongjiang Province. Chinese Journal of Veterinary Medicine, 2011, 47(11):20-22. (in Chinese) 赵阳, 王艺萌, 张文龙, 马波, 王君伟. 黑龙江省部分地区鹅致病性大肠杆菌血清型鉴定及药敏试验. 中国兽医杂志, 2011, 47(11):20-22.
    [30] 李沐森. 吉林城区鸡致病性大肠杆菌的分离鉴定及灭活疫苗研制. 中国农业科学院硕士学位论文, 2007.
    [31] Asai T, Masani K, Sato C, Hiki M, Usui M, Baba K, Ozawa M, Harada K, Aoki H, Sawada T. Phylogenetic groups and cephalosporin resistance genes of Escherichia coli from diseased food-producing animals in Japan. Acta Veterinaria Scandinavica, 2011, 53(1):52.
    [32] 金文杰. 禽致病性大肠杆菌耐药基因和毒力因子的分子流行病学及HPI Irp1细胞表位作用的研究. 扬州大学博士学位论文, 2006.
    [33] 郑志明. 禽致病性大肠杆菌流行病学调查及三株大肠杆菌对磷霉素耐药机制的初探. 扬州大学硕士学位论文, 2007.
    [34] 赵李祥. 禽病原性大肠杆菌与尿道致病性大肠杆菌毒力基因相关性与体内外表达差异及其ftsk突变株的研究. 扬州大学博士学位论文, 2008.
    [35] Tivendale KA, Noormohammadi AH, Allen JL, Browning GF. The conserved portion of the putative virulence region contributes to virulence of avian pathogenic Escherichia coli. Microbiology, 2009, 155(2):450-460.
    [36] Ozawa M, Harada K, Kojima A, Asai T, Sameshima T. Antimicrobial susceptibilities, serogroups, and molecular characterization of avian pathogenic Escherichia coli isolates in Japan. Avian Diseases, 2008, 52(3):392-397.
    [37] Zhang YY, Shi QM, Fang H, Chen CZ, Liu YJ, Yang YL. Detection on pathogenicity islands of Yersinia enterocolitica HPI from Escherichia coli strains in diarrheic young raccoon dogs. Chinese Journal of Zoonoses, 2012, 28(2):179-182. (in Chinese) 张艳英, 史秋梅, 房海, 陈翠珍, 刘亚君, 杨月琳. 腹泻仔貉检出携带耶尔森菌HPI毒力岛的大肠杆菌. 中国人兽共患病学报, 2012, 28(2):179-182.
    [38] Gao ZG, Sha YN. Screening of avian E. coli virulence island (HPI) and Type Ⅰ integron in Hohhot. Heilongjiang Animal Science and Veterinary Medicine, 2019, (16):96-99. (in Chinese) 高志刚, 沙玉宁. 呼和浩特地区禽源大肠杆菌毒力岛(HPI)及Ⅰ型整合子筛查. 黑龙江畜牧兽医, 2019, (16):96-99.
    [39] Wang YP, Dong L, Guo SJ, Xu QQ, Mo L, Wang JL, Liu JS, Shen ZQ. Establishment and application of PCR detection method for HPI irp2 gene of avian Escherichia coli. Chinese Journal of Veterinary Medicine, 2017, 53(1):86-89. (in Chinese) 王艳萍, 董林, 郭时金, 徐倩倩, 莫玲, 王金良, 刘吉山, 沈志强. 禽源性大肠杆菌HPI毒力岛irp2基因PCR检测方法的建立与应用. 中国兽医杂志, 2017, 53(1):86-89.
    [40] Lv DH, Wei WK, Huang Z, Wen XH. Virulence genotypes of 105Escherichia coli with high pathogenicity island (HPI) and the HPI sequence analysis. Chinese Journal of Preventive Veterinary Medicine, 2012, 34(1):71-73. (in Chinese) 吕殿红, 魏文康, 黄忠, 温肖会. 105株携带耶尔森菌强毒力岛大肠杆菌的毒力基因型和部分菌株毒力因子序列研究. 中国预防兽医学报, 2012, 34(1):71-73.
    [41] Maynard C, Bekal S, Sanschagrin F, Levesque RC, Brousseau R, Masson L, Lariviere S, Harel J. Heterogeneity among virulence and antimicrobial resistance gene profiles of extraintestinal Escherichia coli isolates of animal and human origin. Journal of Clinical Microbiology, 2004, 42(12):5444-5452.
    [42] Tan C, Tang X, Zhang X, Ding Y, Zhao Z, Wu B, Cai X, Liu Z, He Q, Chen H. Serotypes and virulence genes of extraintestinal pathogenic Escherichia coli isolates from diseased pigs in China. Veterinary Journal, 2012, 192(3):483-488.
    引证文献
    网友评论
    网友评论
    分享到微博
    发 布
引用本文

张立伟,石玉祥,张永英,李欣泽,郝贺,朱原,周双,王芝超,杜瞳彤,阿合玛尔列&#;海依拉提,时欣欣,韩旺,仝星,朱阵. 鸡源大肠杆菌毒力基因检测及分子流行特征[J]. 微生物学报, 2020, 60(11): 2498-2510

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:2020-01-18
  • 最后修改日期:2020-04-06
  • 在线发布日期: 2020-11-03
文章二维码