酿酒酵母SRP40基因对细胞耐受性影响的研究
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国家自然科学基金(21978065,21206028);教育部“春晖计划”合作科研项目(Z2017012)


Effect of SRP40 gene on cell tolerance of Saccharomyces cerevisiae
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    摘要:

    【目的】本论文研究酿酒酵母srp4039突变基因对酵母细胞异丁醇耐受性的影响。【方法】首先,以酿酒酵母野生型W303-1A和突变株EMS39染色体DNA为模板克隆野生型SRP40基因和srp4039突变基因;然后,将野生型SRP40基因和srp4039突变基因分别连接到质粒YCplac22上,构建质粒YCplac22-SRP40和YCplac22-srp4039。将质粒YCplac22-SRP40、YCplac22-srp4039以及YCplac22空质粒分别转化入野生型酿酒酵母W303-1A中,分别得到W303-1A-SRP40工程菌、W303-1A-srp4039工程菌和W303-1A-control工程菌。将3株工程菌分别置于含1.0%异丁醇、1.3%异丁醇、8.0%乙醇和0.5%异戊醇的CM培养基中进行发酵,测定细胞密度(OD600)和生长情况,并计算2-10 h的比生长速率(μ)。将3株工程菌于55℃热激4 min后做稀释实验(dilution),观察它们在平板上的生长情况。最后,对野生型SRP40基因、srp4039突变基因的氨基酸序列进行生物信息学分析。【结果】在不含异丁醇(0%异丁醇)的培养基中,3株工程菌无明显差异。在含1.0%异丁醇和1.3%异丁醇的CM培养基中,发酵24 h工程菌W303-1A-srp4039的细胞密度分别是工程菌W303-1A-SRP40的1.12倍和1.06倍,是工程菌W303-1A-control的1.10倍和1.10倍;工程菌W303-1A-srp4039的比生长速率(μ)分别是工程菌W303-1A-SRP40的1.07倍和1.10倍,是对照菌W303-1A-control的1.10倍和1.10倍。在含8.0%乙醇和0.5%异戊醇的CM培养基中,发酵24 h工程菌W303-1A-srp4039的细胞密度分别是工程菌W303-1A-SRP40的1.12倍和1.01倍,是对照菌W303-1A-control的1.17倍和1.07倍;工程菌W303-1A-srp4039的比生长速率(μ)分别是工程菌W303-1A-SRP40的1.37倍和1.07倍,是对照菌W303-1A-control的1.31倍和1.09倍。工程菌W303-1A-srp4039在热激后生长仍优于其他2株菌。生物信息学分析发现,Srp4039蛋白与硅藻的胸膜蛋白-1具有相似的结构。【结论】本研究发现酿酒酵母srp4039突变基因能够提升细胞的异丁醇耐受性,此外对提升细胞的乙醇耐受性、异戊醇耐受性和耐热性也有一定的作用。同时,我们发现Srp4039蛋白与硅藻的胸膜蛋白-1具有相似的结构,说明其可能具有胸膜蛋白-1的功能,推测该蛋白在细胞壁维持方面有作用。这些研究将为提高酿酒酵母对乙醇、异丁醇、异戊醇和高温等的抗逆性提供新思路。

    Abstract:

    [Objective] In this study, the effect of the mutant srp4039 gene on isobutanol tolerance of Saccharomyces cerevisiae was studied.[Methods] Firstly, the wild-type SRP40 gene and the mutant srp4039 gene were respectively cloned from the chromosome DNAs of the wild-type strain W303-1A and the mutant EMS39 of S. cerevisiae. Then, SRP40 and srp4039 were respectively ligated to YCplac22 to construct the recombinant plasmids YCplac22-SRP40 and YCplac22-srp4039. The obtained recombinant plasmids and the YCplac22 empty plasmid were respectively transformed into the wild-type strain W303-1A to construct the engineering strains W303-1A-SRP40, W303-1A-srp4039, and W303-1A-control. The three engineering strains were then fermented in the complete media containing 1.0% isobutanol, 1.3% isobutanol, 8.0% ethanol, and 0.5% isoamyl alcohol, respectively. The cell density (OD600) was measured, and the specific growth rate in 2-10 h was calculated. The three engineering strains were heated at 55℃ for 4 min and then diluted for observation of cell growth on the plate. Finally, the amino acid sequences of SRP40 and srp4039 were analyzed by bioinformatics tools.[Results] In the medium without isobutanol (0% isobutanol), the three strains showed no significant difference. After fermentation for 24 h in the complete media containing 1.0% isobutanol and 1.3% isobutanol, W303-1A-srp4039 showed the cell density 1.12 and 1.06 times that of W303-1A-SRP40, and 1.10 and 1.10 times that of W303-1A-control, respectively; the specific growth rate of W303-1A-srp4039 was 1.07 and 1.10 times as high as that of W303-1A-SRP40, and 1.10 and 1.10 times as high as that of W303-1A-control, respectively. After fermentation for 24 h in the complete media containing 8.0% ethanol and 0.5% isoamyl alcohol, W303-1A-srp4039 showed the cell density 1.12 and 1.01 times that of W303-1A-SRP40, and 1.17 and 1.07 times that of W303-1A-control, respectively; W303-1A-srp4039 showed the specific growth rate 1.37 and 1.07 times as high as that of W303-1A-SRP40, and 1.31 and 1.09 times as high as that of W303-1A-control, respectively. Moreover, W303-1A-srp4039 still grew better than the other two strains after heat shock. The bioinformatics analysis showed that Srp4039 protein had a similar structure to the pleuralin-1 of diatom.[Conclusion] We found that the srp4039 mutant gene can enhance the tolerance of S. cerevisiae to isobutanol, and plays a role in enhancing the tolerance to ethanol, isoamyl alcohol, and heat. Srp4039 protein has a similar structure with the pleuralin-1 of diatom, which indicates that Srp4039 protein may have the function of pleuralin-1 and play a role in cell wall maintenance. These findings will provide new ideas for improving the tolerance of S. cerevisiae to ethanol, isobutanol, isoamyl alcohol, and high temperature.

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邵文举,鲁尚昆,张爱利. 酿酒酵母SRP40基因对细胞耐受性影响的研究[J]. 微生物学报, 2022, 62(3): 1150-1165

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  • 收稿日期:2021-07-09
  • 最后修改日期:2021-11-01
  • 在线发布日期: 2022-03-07
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