窖泥优势拟杆菌纲微生物Petrimonas sulfuriphila的分离及其功能解析
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国家自然科学基金(32172177)


Isolation and functional analysis of the dominant Bacteroidia species Petrimonas sulfuriphila in pit mud
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    摘要:

    [目的]筛选窖泥中尚未被纯培养的高丰度拟杆菌纲微生物,并在纯培养菌株层面和共培养层面探究其生理代谢特征及生态学功能。[方法]采用传代培养提高窖泥拟杆菌纲微生物的相对丰度,在此基础上进行筛菌实验,并通过发酵实验解析主体拟杆菌的代谢特征及其与主体己酸菌的相互作用关系。[结果]成功筛选到Petrimonas sulfuriphila LBM11005,该菌的主要代谢产物为乙酸和丙酸,且葡萄糖能促进该菌的生长。无论是否存在底物竞争效应,P. sulfuriphila LBM11005均能与窖泥主体己酸菌Caproicibacterium sp. LBM19010在代谢物水平上发生相互作用,表现为后者可以利用前者的代谢产物丙酸进行碳链延伸,产生新的奇数碳脂肪酸——戊酸和庚酸。[结论]探明了窖泥主体拟杆菌纲微生物P. sulfuriphila LBM11005的基本生理代谢特征,且该菌与主体己酸菌相互作用,贡献于更长碳链奇数碳脂肪酸的合成。

    Abstract:

    [Objective]To isolate abundant uncultured Bacteroidia species from pit mud and analyze its physiological metabolism and ecological functions in the cases of pure culture and co-culture.[Methods] The relative abundance of Bacteroidia species was improved by subculture.Pure Bacteroidia species were isolated with the agar dilution method,and the metabolic characteristics of the dominant Bacteroidia species and the interaction with the dominant caproate-producing bacteria were explored based on fermentation test.[Results] Petrimonas sulfuriphila LBM11005 was screened out.Acetate and propionate were the main metabolites of this strain,and glucose promoted its growth.The metabolites ofLBM11005 interacted with those of Caproicibacterium sp.LBM19010,the dominant caproate-producing species in pit mud,regardless of substrate competition.To be specific,LBM19010 utilized propionate,the metabolite of LBM11005,for chain extension to produce odd-numbered carbon fatty acids of pentanoate and heptanoate.[Conclusion] This study reveals the fundamental physiological and metabolic characteristics of P.sulfuriphila LBM11005,one of the dominant Bacteroidia species in pit mud.This strain interacts with the dominant caproate-producing bacterium to contribute to the synthesis of longer odd-numbered carbon fatty acids.

    参考文献
    [1] Ding XF, Wu CD, Huang J, Zhou RQ. Interphase microbial community characteristics in the fermentation cellar of Chinese Luzhou-flavor liquor determined by PLFA and DGGE profiles. Food Research International,2015, 72:16-24.
    [2] Lu MM, Zhou WC, Ji F, Wu JF, Nie Y, Ren C, Xu Y. Profiling prokaryotic community in pit mud of Chinese strong-aroma type liquor by using oligotrophic culturing. International Journal of Food Microbiology,2021, 337:108951.
    [3] 胡晓龙,王康丽,余苗,田瑞杰,范海报,孙继祥,张军,杨旭,马歌丽,魏涛.浓香型窖泥原核微生物群落多样性及其在窖池中的空间异质性.食品与发酵工业, 2020, 46(11):77-84. Hu XL, Wang KL, Yu M, Tian RJ, Fan HB, Sun JX, Zhang J, Yang X, Ma GL, Wei T. Biodiversity and spatial heterogeneity of prokaryote community in strong-flavor baijiu fermentation pit muds. Food and Fermentation Industries, 2020, 46(11):77-84.(in Chinese)
    [4] Chai LJ, Qian W, Zhong XZ, Zhang XJ, Lu ZM, Zhang SY, Wang ST, Shen CH, Shi JS, Xu ZH. Mining the factors driving the evolution of the pit mud microbiome under the impact of long-term production of strong-flavor baijiu. Applied and Environmental Microbiology, 2021, 87(17):e0088521.
    [5] Zhang YY, Zhu XY, Li XZ, Tao Y, Jia J, He XH. The process-related dynamics of microbial community during a simulated fermentation of Chinese strong-flavored liquor. BMC Microbiology, 2017, 17(1):196.
    [6] Gao JJ, Liu GY, Li AJ, Liang CC, Ren C, Xu Y. Domination of pit mud microbes in the formation of diverse flavour compounds during Chinese strong aroma-type baijiu fermentation. LWT-Food Science and Technology,2021, 137:110442.
    [7] Hu XL, Du H, Ren C, Xu Y. Illuminating anaerobic microbial community and cooccurrence patterns across a quality gradient in Chinese liquor fermentation pit muds. Applied and Environmental Microbiology,2016, 82(8):2506-2515.
    [8] Zou W, Zhao CQ, Luo HB. Diversity and function of microbial community in Chinese strong-flavor baijiu ecosystem:a review. Frontiers in Microbiology,2018, 9:671.
    [9] 辜杨,项兴本,王少磊,曹荣升,任聪,范文来,徐岩.基于窖泥微生物相对定量与绝对定量联用的窖泥老熟特征分析.微生物学报,2021, 61(11):3444-3457. Gu Y, Xiang XB, Wang SL, Cao RS, Ren C, Fan WL, Xu Y. Profiling the community structure of pit clay during aging process with the combination of relative and absolute quantitative approaches. Acta Microbiologica Sinica, 2021, 61(11):3444-3457.(in Chinese)
    [10] Fu JX, Chen L, Yang SZ, Li YZ, Jin L, He XP, He L, Ao XL, Liu SL, Liu AP, Yang Y, Ma BC, Cui XW, Chen SJ, Zou LK. Metagenome and analysis of metabolic potential of the microbial community in pit mud used for Chinese strong-flavor liquor production. Food Research International,2021, 143:110294.
    [11] Tao Y, Li JB, Rui JP, Xu ZC, Zhou Y, Hu XH, Wang X, Liu MH, Li DP, Li XZ. Prokaryotic communities in pit mud from different-aged cellars used for the production of Chinese strong-flavored liquor. Applied and Environmental Microbiology, 2014, 80(7):2254-2260.
    [12] 胡晓龙,王康丽,余苗,牛广杰,孟书剑,马安银,李红,樊建辉,何培新.基于高通量测序的浓香型窖泥原核微生物群落的窖池空间分布.中国酿造, 2020, 39(6):167-172. Hu XL, Wang KL, Yu M, Niu GJ, Meng SJ, Ma AY, Li H, Fan JH, He PX. Spatial distribution of prokaryotic microbial community of strong-flavor pit mud based on high-throughput sequencing. China Brewing,2020, 39(6):167-172.(in Chinese)
    [13] Liu CL, Huang D, Zhang WX. Combining culture-dependent and culture-independent molecular methods for the isolation and purification of a potentially novel anaerobic species from pit mud in a Chinese liquor distillery. Journal of the Institute of Brewing,2016, 122(4):754-762.
    [14] Chai LJ, Lu ZM, Zhang XJ, Ma J, Xu PX, Qian W, Xiao C, Wang ST, Shen CH, Shi JS, Xu ZH. Zooming in on butyrate-producing clostridial consortia in the fermented grains of baijiu via gene sequence-guided microbial isolation. Frontiers in Microbiology, 2019, 10:1397.
    [15] Gu Y, Zhu XJ, Lin F, Shen CH, Li Y, Ao L, Fan WL, Ren C, Xu Y. Caproicibacterium amylolyticum gen. nov., sp. nov., a novel member of the family Oscillospiraceae isolated from pit clay used for making Chinese strong aroma-type liquor. International Journal of Systematic and Evolutionary Microbiology,2021, 71(4):004789.
    [16] Mu DS, Liang QY, Wang XM, Lu DC, Shi MJ, Chen GJ, Du ZJ. Metatranscriptomic and comparative genomic insights into resuscitation mechanisms during enrichment culturing. Microbiome,2018, 6(1):230.
    [17] Koch AL. Oligotrophs versus copiotrophs. BioEssays, 2001, 23(7):657-661.
    [18] Holdeman LV, Cato EP, Moore WEC. Anaerobe Laboratory Manual. 4th edn. Blacksburg:VA:Virginia Polytechnic Institute and State University, 1977.
    [19] Walters W, Hyde ER, Berg-Lyons D, Ackermann G, Humphrey G, Parada A, Gilbert JA, Jansson JK, Caporaso JG, Fuhrman JA, Apprill A, Knight R. Improved bacterial 16S rRNA gene (V4 and V4-5) and fungal internal transcribed spacer marker gene primers for microbial community surveys. mSystems, 2015, 1(1):e00009-15.
    [20] Hahnke S, Langer T, Koeck DE, Klocke M. Description of Proteiniphilum saccharofermentans sp. nov., Petrimonas mucosa sp. nov. and Fermentimonas caenicola gen. nov., sp. nov., isolated from mesophilic laboratory-scale biogas reactors, and emended description of the genus Proteiniphilum. International Journal of Systematic and Evolutionary Microbiology, 2016, 66(3):1466-1475.
    [21] Wang HL, Gu Y, Zhou WC, Zhao D, Qiao ZW, Zheng J, Gao JJ, Chen X, Ren C, Xu Y. Adaptability of a caproate-producing bacterium contributes to its dominance in an anaerobic fermentation system. Applied and Environmental Microbiology,2021, 87(20):e0120321.
    [22] 张会敏,王艳丽,孟雅静,王银辉,李安军,王志强,张治洲,邢新会.浓香型白酒发酵新老窖泥理化因子和原核微生物群落结构差异分析.食品科学, 2020, 41(6):207-214. Zhang HM, Wang YL, Meng YJ, Wang YH, Li AJ, Wang ZQ, Zhang ZZ, Xing XH. Differences in physicochemical properties and prokaryotic microbial communities between young and old pit mud from Chinese strong-flavor baijiu brewing. Food Science, 2020, 41(6):207-214.(in Chinese)
    [23] Tao Y, Wang X, Li XZ, Wei N, Jin H, Xu ZC, Tang QL, Zhu XY. The functional potential and active populations of the pit mud microbiome for the production of Chinese strong-flavour liquor. Microbial Biotechnology,2017, 10(6):1603-1615.
    [24] 任聪,杜海,徐岩.中国传统发酵食品微生物组研究进展.微生物学报,2017, 57(6):885-898. Ren C, Du H, Xu Y. Advances in microbiome study of traditional Chinese fermented foods. Acta Microbiologica Sinica, 2017, 57(6):885-898.(in Chinese)
    [25] Fan WL, Xu Y, Qian M. Current practice and future trends of aroma and flavor research in Chinese baijiu. ACS Symposium Series,Washington, DC:American Chemical Society, 2019:145-175.
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引用本文

郑慧珍,王慧琳,高江婧,任聪,范文来,徐岩. 窖泥优势拟杆菌纲微生物Petrimonas sulfuriphila的分离及其功能解析[J]. 微生物学报, 2022, 62(9): 3373-3386

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  • 收稿日期:2021-11-27
  • 最后修改日期:2022-02-19
  • 在线发布日期: 2022-09-05
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