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酿酒酵母INO80染色质重塑复合物调控基因表达的研究进展
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国家自然科学基金(21978168);国家重点研发计划(2022YFE0108500)


Regulation of gene expression by the chromatin remodeling complex INO80 in budding yeast Saccharomyces cerevisiae
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    摘要:

    表观遗传调控是真核生物基因表达精细调控的重要组成部分,主要包括DNA甲基化、组蛋白修饰和染色质重塑。其中,染色质重塑因子可影响组蛋白修饰酶和转录因子与特定位点的结合,在基因表达调控中占有重要地位。INO80复合物是进化上保守的染色质重塑复合物,能利用ATP水解获得的能量促进核小体的滑动和驱逐。INO80复合物除了在DNA复制、修复中发挥重要功能外,还通过改变DNA可及性调控酿酒酵母的基因表达。本文综述了染色质重塑复合物的分类及组成,重点介绍了酿酒酵母多亚基复合物INO80在基因表达调控中的重要功能,包括驱逐RNA聚合酶Ⅱ、响应信号转导途径和改变基因表达水平等,并着重总结了其在酿酒酵母环境胁迫响应机理中的研究进展。深入研究INO80染色质重塑复合物的功能,可为理解真核生物精细代谢调控的机制,并进一步开发基于染色质重塑等表观调控水平的微生物代谢工程和合成生物学改造策略,提高菌株的环境胁迫耐受性和发酵性能提供基础。

    Abstract:

    Epigenetic control plays important roles in regulation of eukaryotic gene expression, which includes DNA methylation, histone modification, and chromatin remodeling. Among them, chromatin remodelers function by affecting the binding of histone-modifying enzymes and transcription factors. The chromatin remodeling complex INO80 is evolutionarily conserved and it promotes nucleosome sliding and eviction by using the energy obtained from ATP hydrolysis. In addition to the role in DNA replication and repair, INO80 regulates the gene expression in budding yeast Saccharomyces cerevisiae by altering DNA accessibility. This review summarized the classification and composition of chromatin remodeling complexes in S. cerevisiae and introduced the roles (including expulsion of RNA polymerase Ⅱ, response to signaling pathways, and alteration of gene expression levels) of the multi-subunit complex INO80 in the dynamic regulation of gene expression. Furthermore, the research progress in the role of INO80 in the response of S. cerevisiae to environmental stress was reviewed. Studying the functions of INO80 benefits understanding the delicate metabolic regulation mechanisms in eukaryotes, which provides a basis for developing microbial metabolic engineering and synthetic biology tools employing chromatin remodelers and other epigenetic regulators to improve stress tolerance and fermentation efficiency.

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袁冰,汪伟滨,程诚,赵心清. 酿酒酵母INO80染色质重塑复合物调控基因表达的研究进展. 微生物学报, 2023, 63(2): 553-566

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历史
  • 收稿日期:2022-06-17
  • 最后修改日期:
  • 录用日期:2022-08-28
  • 在线发布日期: 2023-02-21
  • 出版日期: 2023-02-04